BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037G04LP1|AL430430
(872 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1419 1599 0.0
>3x_Contig1419
Length = 7355
Score = 1599 bits (794), Expect = 0.0
Identities = 844/873 (96%), Gaps = 1/873 (0%)
Strand = Plus / Minus
Query: 1 gatcataaaccaaggtatgactaatgagagagctagattcgaaagggaattcacgaagta 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1725 gatcataaaccaaggtatgactaatgagagagcaagattcgaaagggaattcacgaagta 1666
Query: 61 caataaaggggctacgattttgttaagagaacatacgawggtcatcgatccagaaattcc 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1665 caataaaggggctacgattttgttaagagaacatacgaaggtcatcgatccagaaattcc 1606
Query: 121 cgtcgcagaacaattagatgacggatcagaagatattgawggtaaaatctcatatttgch 180
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1605 cgtcgcagaacaattagatgacggatcagaagatattgaaggtaaaatctcatatttgca 1546
Query: 181 gattaacgatgaagaaaatgataagtctttggttaagacctgtgttactwatacmagaca 240
||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||
Sbjct: 1545 gattaacgatgaagaaaatgataagtctttggttaagacctgtgtaactaatacaagaca 1486
Query: 241 aattgtgacagagtatatcaatggttacacgttccagttcagtgccggtgagttcttcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1485 aattgtgacagagtatatcaatggttacacgttccagttcagtgccggtgagttcttcca 1426
Query: 301 amathataattcaattcttccaagtgtaactgcttatgttcgthag-acttacagattga 359
| || |||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 1425 aaataataattcaattcttccaagtgtaactgcttatgttcgtaagtacttacagattga 1366
Query: 360 hggatcaacacctgaagatcctcattatttggtcgatgcatactgtggttccgggttatt 419
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1365 aggatcaaaacctgaagatcctcattatttggtcgatgcatactgtggttccgggttatt 1306
Query: 420 tagtatcacgtcttcmamaggtgttgatagagtgatcggtgttgamgtcagtgctgacag 479
||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1305 tagtatcacgtcttcaaaaggtgttgatagagtgatcggtgttgaagtcagtgctgacag 1246
Query: 480 tgttgcmttcgctgagcgttacgctaaggcaaacggtgtcgagaattgtyagtttattgt 539
|||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1245 tgttgcattcgctgagcgtaacgctaaggcaaacggtgtcgagaattgtaagtttattgt 1186
Query: 540 gggttaagcagagaaaatctttggmtcaattgatacaccatgtgatagawccagtgtgat 599
|||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 1185 gggtaaagcagagaaaatctttggatcaattgatacaccatgtgatagaaccagtgtgat 1126
Query: 600 ttthgatccaccaaggaaaggttgtgacgatattttthtkaagccattagctgagtacaa 659
||| ||||||||||||||||||||||||||||||||| | |||| |||||||||||||||
Sbjct: 1125 tttagatccaccaaggaaaggttgtgacgatatttttatgaagcaattagctgagtacaa 1066
Query: 660 tccggctagamttgtttacatttcctgtaacgtccattcccaagccagagatgtcgaata 719
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1065 tccggctagaattgtttacatttcctgtaacgtccattcccaagccagagatgtcgaata 1006
Query: 720 ctttttgaaagagaccgaaaatggtaagcattataagattganagtttaagaggttttga 779
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1005 ctttttgaaagagaccgaaaatggtaagcattataagattgaaagtttaagaggttttga 946
Query: 780 tttcttccctcaaactcaccatgttgaatcggtttgtgtactcagcagatcttaagawcc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 945 tttcttccctcaaactcaccatgttgaatcggtttgtgtactcagcagatcttaagaacc 886
Query: 840 cctccccaccctatcaattctcattaattattt 872
|||||||||||||||||||||||||||||||||
Sbjct: 885 cctccccaccctatcaattctcattaattattt 853
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.713 1.32
Gapped
Lambda K H
1.40 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4777
Number of Sequences: 1807
Number of extensions: 4777
Number of successful extensions: 87
Number of sequences better than 1.0e-20: 1
length of query: 872
length of database: 10,358,551
effective HSP length: 16
effective length of query: 856
effective length of database: 10,329,639
effective search space: 8842170984
effective search space used: 8842170984
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)